After the biggest mass extinction in Earth’s history – 250 million years ago – algae and bacteria in the ocean rebounded so fast that they consumed virtually all the oxygen in the sea, slowing the recovery of the rest of marine animals for several million years.
BY LOUIS BERGERON
A mass extinction is hard enough for Earth’s biosphere to handle, but when you chase it with prolonged oxygen deprivation, the biota ends up with a hangover that can last millions of years.
Such was the situation with the greatest mass extinction in Earth’s history 250 million years ago, when 90 percent of all marine animal species were wiped out, along with a huge proportion of plant, animal and insect species on land.
A massive amount of volcanism in Siberia is widely credited with driving the disaster, but even after the immense outpourings of lava and toxic gases tapered off, oxygen levels in the oceans, which had been depleted, remained low for about 5 million years, slowing life’s recovery there to an unusual degree.
The reason for the lingering low oxygen levels has puzzled scientists, but now Stanford researchers have figured out what probably happened. By analyzing the chemical composition of some then-underwater limestone beds deposited over the course of the recovery in what is now southern China, they have determined that while it took several million years for most ecosystems in the ocean to recover, tiny single-celled algae and bacteria bounced back much more quickly.
In fact, according to biogeochemist Katja Meyer, the tiny organisms rebounded to such an extent that the bigger life forms couldn’t catch a break – much less their breath – because the little ones were enjoying a sustained population explosion.
As the vast hordes of tiny dead organisms rotted, dissolved oxygen in the seawater was consumed by aerobic microbes involved in the decay process, leaving scant oxygen for larger organisms in what became an oxygen-depleted, or anoxic, environment.
The driver of the ongoing population boom appears to have been the massive amounts of carbon dioxide pumped into the atmosphere during the volcanism, Meyer said, which caused the world to warm.
“More warmth means an invigorated hydrological cycle, so you get more rain and this rain is also more acidic because there is more carbon dioxide dissolved in the rain,” Meyer said.
The increased amounts of more acidic rain increased weathering of the land surface, which sent more nutrients into the ocean, which fueled explosions of life such as algae blooms.
“It is kind of counterintuitive that high productivity on the part of algae and bacteria would likely be generating these toxic geochemical conditions that prevent most of animal life from recovering from mass extinction,” Meyer said.
But the process, she said, is basically the same as when excess runoff from fertilizers goes into a body of water, whether it’s a pond on a golf course or the infamous dead zone in the Gulf of Mexico created by farm runoff carried down the Mississippi River.
“You get this giant bloom of algae and then it starts to smell bad as that algae decays, pulling oxygen out of the water and causing fish die-offs,” Meyer said.
In spite of the almost inestimably high numbers of algae and bacteria living and dying during this time, there is little direct evidence of them in the fossil record because such tiny, soft-bodied creatures just don’t preserve well.
So Meyer and her colleagues had to work with indirect evidence of the microorganisms to determine their abundance during the years after the mass extinction. The population proxy they used was the carbon present in the limestone.
Carbon – like all elements – comes in different varieties, called isotopes, distinguished by the number of neutrons each has in its nucleus. The researchers worked with two carbon isotopes, carbon 12, which has six neutrons, and carbon 13, which has seven.
Both isotopes are present in ocean water, but living things on Earth have always shown a preference for incorporating the lighter isotope, carbon 12, into their structures. Thus, where life is abundant, the ratio of carbon 13 to carbon 12 in seawater is higher than it is where there is no life.
Limestone records the composition of the seawater in which it was deposited, including the relative amounts of light and heavy carbon isotopes, so by analyzing the isotope ratio in the rocks, Meyer could infer the abundance of life in the water where the limestone formed.
Comparable modern environments, such as the Bahama Banks in the Caribbean Sea, where carbonate platforms similar to the limestones are forming, are typically teeming with life at the range of depths in which Meyer’s limestones formed. In these environments, the ratio of carbon 13 to carbon 12 is generally constant from shallow to deep water.
But microorganisms are typically most abundant in shallow waters, so if marine life in the era after the mass extinction had been confined to algae and bacteria, then the shallower depths should show a markedly greater ratio of carbon 13 to carbon 12 than would be found at depth.
Meyer’s analysis showed there was a difference of about 4 parts per thousand in carbon isotope ratios from the shallow waters to depths, roughly twice what it is today.
“We only see this gradient in the interval after the mass extinction prior to the recovery of animal life,” said Meyer.
Meyer is the lead author of a research paper about the study published last month in Earth and Planetary Science Letters. The extinction 250 million years ago is known as the Permian-Triassic mass extinction, as it coincides with the end of the Permian period and the beginning of the Triassic period on the geologic time scale.
“It appears there was a huge amount of biological productivity in the shallow waters that was making the bottom waters uninhabitable for animals,” said Jonathan Payne, assistant professor of geological and environmental sciences, who is a coauthor of the paper and in whose lab Meyer has been working.
“It looks like the whole recovery was slowed by having too much food available, rather than too little,” Payne said. “Most of us think that if the biota isn’t doing well, maybe we should feed it more. This is clearly an example where feeding it less would have been much better.”
Funding for the research was provided by the National Science Foundation, Agouron Institute, American Chemical Society and National Geographic Society.
Editor’s Note
Research paper in Earth and Planetary Science Letters (DOI: 10.1016/j.epsl.2010.12.033)

All right, kill the oceans before the little beggars get the upper hand.
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Correct me if I’m wrong, but it sounds like a couple of scientists went on a (likely government funded) junket to China, and now are fishing for their next big grant — having noticed only some slight variances in Carbon 13 in a rock sample….
I can hear them now…
“Hey Louis, that rock sample that we got from the campsite where you outdrank that sherpa in China… It’s got 0.2 percent more carbon 13 in it from around 200 million years ago than usual, so I’m thinking here… Now if we cut off the ends of the data at 199 and 201 million years, it looks like me might be able to make a real hockey stick outta this thing.. Ya think we should give it a whirl, Louis? Maybe the NSF or some other biased, partisan front organization would spring a few million on a grant for another government bender — to go collect a rock!”
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“…The driver of the ongoing population boom appears to have been the massive amounts of carbon dioxide pumped into the atmosphere during the volcanism, Meyer said…”
This acknowledges that volcanoes are a major source of CO2. There are currently estimated to be 3 million subsea volcanoes.
http://iceagenow.com/Three_Million_Underwater_Volcanoes.htm
If these subsea volcanoes emit CO2 at rates similar to the Lake Nyos vent, then there are 111 Gigatonnes of volcanic CO2, not counting releases from land based volcanoes, put into the atmosphere per year, compared to the mere 130 to 230 million tonnes estimated in Wankapedia.
If their theory is mostly true, then the Triassic ought to be known for rich source rocks all around the world because it is anoxic. I don’t think it is. In fact, Trassic Red Beds
\\ Several independent studies have demonstrated that rich source rocks are largely concentrated in several stratigraphic intervals during the Phanerozoic (the past 542 million years).
(6) The Oligocene-Miocene (34-5 Ma)
(5) The Middle Cretaceous (125-89 Ma)
(4) The Late Jurassic (165-145)
[– Triassic, not listed as a source interval here –]
(3) The Pennsylvanian-Late Permian (318-270)
(2) The Late Devonian (385-360 Ma)
(1) The Silurian (444-416 Ma) //
http://www.geoexpro.com/geoscience/rich-petro/
My guess is that they are looking at a restricted basin artifact, not a world-wide event.
One thing I have never figured out is why an asteroid impact isn’t included in the list of possibilities for extinction AND the the creation of the flood basalts of Siberian Traps.
@ur momisugly kuhnkat
Yes the algae and phytoplanton while alive absorb CO2; the problem that leads to oxygen deprivation arises when these organisms exhaust the available nutrients and then die, and are oxidated (taking up oxygen) or eaten by anoxic bacteria, or at night-time when photosynthesis ceases and respiration takes over. The loss of free dissolved oxygen occurs during algal blooms sparked by excess nutrients in a body of water and is a well documented phenomenon called eutrophication, discovered during the mid-20th century (earlier scientists scorned the idea that overloading a system with nutrients would cause such problems). The relevant passage on this from Wikipedia states:
Under eutrophic conditions, dissolved oxygen greatly increases during the day, but is greatly reduced after dark by the respiring algae and by microorganisms that feed on the increasing mass of dead algae. When dissolved oxygen levels decline to hypoxic levels, fish and other marine animals suffocate. As a result, creatures such as fish, shrimp, and especially immobile bottom dwellers die off.[16] In extreme cases, anaerobic conditions ensue, promoting growth of bacteria such as Clostridium botulinum that produces toxins deadly to birds and mammals. Zones where this occurs are known as dead zones.
Wait, wait, wait…
The spread of ‘diablo rojo’ squid is because of anoxic water. Anoxic water caused by human behavior. Supposedly. But have the waters where the diablo rojo have spread been checked for abundance of bacterial life? I cannot find a conclusive “Yeah, we ruled out bacteria.” So, if there is an uptick in oceanic bacterium, that could really explain quite a bit of the change in biodiversity there, couldn’t it? Any takers on providing the silver bullet to my hypothesis?
http://www.scientificamerican.com/article.cfm?id=climate-change-dead-zones
Hang on a mini. These algae didn’t suck the Oxygen out of the oceans overnight. These processes take hundreds if not thousands of years.
As algae numbers increased, their predators, the algae eaters, would also have increased in numbers keeping up with the available food supply.
Afterall, we’re not talking about life spans of elephants here.
There had to have been a shortage of oxygen in the atmosphere for a long long time leading to the non-replenishment in the oceans via mixing.
I would suggest a mass die off of photosynthesising life forms, possibly from an extended period of lack of sunshine possibly due to volcanism.
Lack of sunshine can also lead to the reduction of temperature gradients leading to less wave mixing. Algae grows in still waters.
I’m hope someone more knowledgable can comment.
“The extinction 250 million years ago is known as the Permian-Triassic mass extinction, as it coincides with the end of the Permian period and the beginning of the Triassic period on the geologic time scale.”
Why is that sentence near the bottom? Are you writing a mystery novel?
While this observation quoted above is valid:
it does not mean that we can build a hypothesis of abundant microbial life in an anoxic environment that leaves no physical remains. Anoxia in the marine environment typically leads to sapropel production.
A search using the following keywords “sapropel permian triassic” finds the following paper:-
Palaeogeography, Palaeoclimatology, Palaeoecology
Volume 252, Issues 1-2, 20 August 2007, Pages 304-327
The Permian-Triassic Boundary Crisis and Early Triassic Biotic Recovery
Just noting as well, that there is a distinct drop in the do18 isotope data centred right on 251.4 Mya, the time of the peak number of extinctions during the event.
The do18 isotope data indicates that temperature fell by as much 7C for half a million years or so (consistent with a really big volcano or a series of large volcanic events which is more likely). I don’t think this has been noticed before because everyone uses a really long smoothing parametre on the isotope data while I have tightened that up as much as seems reasonable.
Last 570 Mys showing the Permian Extinction as one of the features.
http://img823.imageshack.us/img823/9508/tempco2570mlefttoright.png